genomepy.annotation

Annotation class, modules & related functions

Functions

filter_regex(df, regex[, invert_match, column])

Filter a pandas dataframe by a column (default: 1st, contig name).

Classes

Annotation(name[, genomes_dir, quiet])

Manipulate genes and whole gene annotations with pandas dataframes.

Modules

genomepy.annotation.mygene	Mygene.info functions and methods
genomepy.annotation.sanitize	Annotation.sanitize method
genomepy.annotation.utils	Utility functions with gene annotations