genomepy.providers.gencode

Functions

add_grch37(genomes, ftp_link)	gencode's GRCh37 is filed with a unique system
get_gencode2ucsc(genomes)	generate conversion dict for gencode's Ensembl-style names to UCSC-style names.
get_genomes(ftp_link)	genomes dict of the latest gencode release of each major assembly.
get_releases(listing, specie)	return the list of gencode releases found on the site.

Classes

GencodeProvider()

GENCODE genome provider.